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ERROR: Failed building wheel for mpi4py

「ERROR: Failed building wheel for mpi4py」に対する対処法の紹介

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エラー

Ubuntuでmpi4pyをインストールしようとしたらこんなエラーが出た

mtkbirdman@DESKTOP-XXXXXXX:$ pip3 install mpi4py
Defaulting to user installation because normal site-packages is not writeable
Collecting mpi4py
  Using cached mpi4py-3.1.3.tar.gz (2.5 MB)
  Installing build dependencies ... done
  Getting requirements to build wheel ... done
  Preparing metadata (pyproject.toml) ... done
Building wheels for collected packages: mpi4py
  Building wheel for mpi4py (pyproject.toml) ... error
  error: subprocess-exited-with-error

  × Building wheel for mpi4py (pyproject.toml) did not run successfully.
  │ exit code: 1
  ╰─> [148 lines of output]
      running bdist_wheel
      running build
      running build_src
	:
      failure.
      removing: _configtest.c _configtest.o
      error: Cannot compile MPI programs. Check your configuration!!!
      [end of output]

  note: This error originates from a subprocess, and is likely not a problem with pip.
  ERROR: Failed building wheel for mpi4py
Failed to build mpi4py
ERROR: Could not build wheels for mpi4py, which is required to install pyproject.toml-based projects

原因

Failed building wheel for mpi4py - 雑多な技術系メモ

対処法

libopenmpi-devをインストールする

sudo apt install libopenmpi-dev
mtkbirdman@DESKTOP-8OV3GB0:~$ sudo apt install libopenmpi-dev
[sudo] password for mtkbirdman:
Reading package lists... Done
Building dependency tree
Reading state information... Done
The following additional packages will be installed:
  autoconf automake autotools-dev ibverbs-providers libcaf-openmpi-3 libcoarrays-dev libcoarrays-openmpi-dev
  libevent-core-2.1-7 libevent-dev libevent-extra-2.1-7 libevent-openssl-2.1-7 libevent-pthreads-2.1-7 libfabric1
  libhwloc-dev libhwloc-plugins libhwloc15 libibverbs-dev libibverbs1 libltdl-dev libnl-3-200 libnl-3-dev
  libnl-route-3-200 libnl-route-3-dev libnuma-dev libopenmpi3 libpmix2 libpsm-infinipath1 libpsm2-2 librdmacm1
  libtool libxnvctrl0 m4 ocl-icd-libopencl1 openmpi-bin openmpi-common
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc gettext libhwloc-contrib-plugins libtool-doc openmpi-doc gcj-jdk
  m4-doc opencl-icd
The following NEW packages will be installed:
  autoconf automake autotools-dev ibverbs-providers libcaf-openmpi-3 libcoarrays-dev libcoarrays-openmpi-dev
  libevent-core-2.1-7 libevent-dev libevent-extra-2.1-7 libevent-openssl-2.1-7 libevent-pthreads-2.1-7 libfabric1
  libhwloc-dev libhwloc-plugins libhwloc15 libibverbs-dev libibverbs1 libltdl-dev libnl-3-200 libnl-3-dev
  libnl-route-3-200 libnl-route-3-dev libnuma-dev libopenmpi-dev libopenmpi3 libpmix2 libpsm-infinipath1 libpsm2-2
  librdmacm1 libtool libxnvctrl0 m4 ocl-icd-libopencl1 openmpi-bin openmpi-common
0 upgraded, 36 newly installed, 0 to remove and 129 not upgraded.
Need to get 7598 kB/7798 kB of archives.
After this operation, 33.2 MB of additional disk space will be used.
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Fetched 7598 kB in 28s (267 kB/s)
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Setting up libpsm-infinipath1 (3.3+20.604758e7-6) ...###########################################################################################################.........................................................................]
update-alternatives: using /usr/lib/libpsm1/libpsm_infinipath.so.1.16 to provide /usr/lib/x86_64-linux-gnu/libpsm_infinipath.so.1 (libpsm_infinipath.so.1) in auto mode
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update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode#################################################################..................................................................]
Setting up libevent-extra-2.1-7:amd64 (2.1.11-stable-1) ...##############################################################################################################................................................................]
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Setting up libcaf-openmpi-3:amd64 (2.8.0-1) ...###########################################################################################################################################################################...............]
Setting up openmpi-bin (4.0.3-0ubuntu1) ...###################################################################################################################################################################################...........]
update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode
update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode
Setting up libcoarrays-openmpi-dev:amd64 (2.8.0-1) ...###########################################################################################################################################################################........]
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update-alternatives: using /usr/lib/x86_64-linux-gnu/openmpi/include to provide /usr/include/x86_64-linux-gnu/mpi (mpi-x86_64-linux-gnu) in auto mode#################################################################################...]
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もういちどmpi4pyをインストールしてみる

mtkbirdman@DESKTOP-XXXXXXX:~$ python3.10 -m pip install mpi4py
Defaulting to user installation because normal site-packages is not writeable
Collecting mpi4py
  Using cached mpi4py-3.1.3.tar.gz (2.5 MB)
  Installing build dependencies ... done
  Getting requirements to build wheel ... done
  Preparing metadata (pyproject.toml) ... done
Building wheels for collected packages: mpi4py
  Building wheel for mpi4py (pyproject.toml) ... done
  Created wheel for mpi4py: filename=mpi4py-3.1.3-cp310-cp310-linux_x86_64.whl size=3368932 sha256=ca6dc53c0c5ab03b79ac0b8e173940ed5f870e6057d2d766b0b8cd36ef8805b0
  Stored in directory: /home/mtkbirdman/.cache/pip/wheels/75/c7/c1/7f61cbdfb623be299e1457cdf6b44675857b5443a569c63372
Successfully built mpi4py
Installing collected packages: mpi4py
Successfully installed mpi4py-3.1.3

できた

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